manus-skills/.kortix/opencode/skills/data/database-lookup/references/emdb.md
zhukang 1c7abd81d1 All 310 Manus skill-hub community skills as a Kortix marketplace registry
- 310 registry:skill items, 1528 files, 7 categories (hub tags)
- registry.json generated by @kortix/registry buildRegistry
- nested SKILL.md in sn-da-* renamed SUBSKILL.md (no phantom skills)
- provenance + licenses: SOURCES.md
2026-09-15 13:37:20 +08:00

895 B

EMDB (Electron Microscopy Data Bank)

Base URL

https://www.ebi.ac.uk/emdb/api/

Auth

No auth required.

Key Endpoints

Endpoint Description
/entry/{emdb_id} Full entry metadata (e.g. EMD-1234)
/entry/map/{emdb_id} Map/volume metadata
/entry/experiment/{emdb_id} Experimental details
/entry/fitted/{emdb_id} Fitted PDB models
/search/{query}?rows={n} Search entries by keyword

Example Calls

# Entry metadata
https://www.ebi.ac.uk/emdb/api/entry/EMD-1234

# Search for ribosome entries
https://www.ebi.ac.uk/emdb/api/search/ribosome?rows=5

# Experimental details
https://www.ebi.ac.uk/emdb/api/entry/experiment/EMD-1234

Response Format

JSON. Search includes pagination and matching entry array.

Rate Limits

EBI fair-use policy. Map files (MRC/CCP4) available via FTP for bulk access.